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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889856.1_cds_XP_016444526.1_39575
CDS Infomation

[gene=LOC107769784] [db_xref=GeneID:107769784] [protein=2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like] [protein_id=XP_016444526.1] [location=join(157036..157236,158929..159066,159315..159497,160875..161032,161125..161224,161627..161738,162016..162155,162729..162911,162998..163165)] [gbkey=CDS]
Sequence

ATGGCCATTTGGATTTCAAGATCAATTACAAGAATCTTTAACCATTCTCTTCAAAGGGCT
TGTCCCTTGTCTCTTTTCCACCAGAGAAGTTCAAGGCCATTTTCCTATTTCGAGTCCACG
AAAGGAAGAGAGCAAATAGAGTGCCCACACAACTATGAGAAGGATAATTATCATGTTGAA
ATTAATCTTGATGAGAACCAAGTCTTGGATTTCCCAGGAGGAAAAATTCCATTTACTTCT
CAAATGAAATTCATTCCTGAATCATCCGAAACAAGGTTAGCTTGTTATCGTATCCTTGAC
AATAATGGCTATCTAATTCCAGGCAGTGTATTCGAGCAGGTGAGTAAAGATTTGGCAGTG
AAAATGTATAGAACAATGGTTACCCTTCAAATTATGGACTCCATTTTCGATGAAGCAAAA
AAACAGGGCAGGTTATCCTTTTATCTAACAACTGTTGGAGAAGAGGTCATTAACATAGCT
TCTGCTGCTGCCCTTACCCCAGAAGACATTGTGTTGCCTCAGTACAGGGAGCCCGGGGTT
CTTTTATGGCGTGGCTTCACCCTACAAGAATTTGCCAATCAATTGCTTGGAAACAAGGGT
GACAATGGGAAAGGCAGGCAAATGCCAATACATTATGGCTCTAACAAGCTCAATTACTTC
ACCGTTTCTTCAACTATTGCCACACAGCTTCCACAGGCAGTAGGCGTGGCTTATTCTCTG
AAAATGGACAAAAAGGAGGCTTGTGTTGTCACTTATTTTGGAGATGGCACCACTAGTGAG
GGAGATTTCCATGCTGCTTTAAATTTTGCGGCAGTTCTGGAAGTTCCTGTTATATTTCTA
TGTCGCAATAATGGATGGGCAATTAGCACCCCTGTGGCTGAACAATTTCGAAGTGATGGA
ATCGCCATTAAAGGGCAGGGTTATGGAGTTCGAAGCATTCGAGTAGATGGCAATGATGCT
CTTGCAGTTTATAGTGCTATTCGTTCTGCTCGTAAAATGGCAATAAAAGAACAAAGGCCA
ATATTAGTAGAGGCCATGGCTTATCGAGTGGGCGACCATGCATCATCTGATGATTCTACC
AAGTACCGATCCATGGAGGAAATCGAGTACCGGAGAAGACGAAGCTCAGTCGCCAGATTC
AGAAAATGGATACAGAAAAATGGTTGGTGGAGCGATGAAGATGAATTCGAATTCCGGGGA
AATATCAGAGAGCAGGTGTTGCAAGCAATTCAAGCTGCTGAGGAAGAAGAGAAACCTCCG
TTGGTAGATTTGTTTACTGATGTTTATGACCAGATTCCTTCAAATCTTCAAGAACAAGAG
AGGTATATTAGAGATGCTATAAAGAGACGTCCAAAAGAGTATCCTTCTAATATTCCTCTA
TAG

Peptide Sequence

PEP ID

XP_016444526.1
PEP Infomation

PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like [Nicotiana tabacum]
Sequence

MAIWISRSITRIFNHSLQRACPLSLFHQRSSRPFSYFESTKGREQIECPHNYEKDNYHVE
INLDENQVLDFPGGKIPFTSQMKFIPESSETRLACYRILDNNGYLIPGSVFEQVSKDLAV
KMYRTMVTLQIMDSIFDEAKKQGRLSFYLTTVGEEVINIASAAALTPEDIVLPQYREPGV
LLWRGFTLQEFANQLLGNKGDNGKGRQMPIHYGSNKLNYFTVSSTIATQLPQAVGVAYSL
KMDKKEACVVTYFGDGTTSEGDFHAALNFAAVLEVPVIFLCRNNGWAISTPVAEQFRSDG
IAIKGQGYGVRSIRVDGNDALAVYSAIRSARKMAIKEQRPILVEAMAYRVGDHASSDDST
KYRSMEEIEYRRRRSSVARFRKWIQKNGWWSDEDEFEFRGNIREQVLQAIQAAEEEEKPP
LVDLFTDVYDQIPSNLQEQERYIRDAIKRRPKEYPSNIPL

Transcript Sequence

Gene sequence data has not been registered.